Publications

This table provides an overview of project-related publications.

Author Title Source
2012
E. Papageorgiou, and D.K. Iakovidis Intuitionistic Fuzzy Cognitive Maps IEEE Transactions on Fuzzy Systems, 2012
E.I. Papageorgiou FCM software tool for treatment management of uncomplicated Urinary Tract Infection Computer Methods and Programs in Biomedicine, vol. 105, no. 3, pp. 233-245, 2012
E.I. Papageorgiou and W. Froelich Application of Evolutionary Fuzzy Cognitive Maps for Prediction of Pulmonary Infections IEEE Transactions on Information Technology in Biomedicine, vol.16, no. 1, pp. 143-149, 2012
E.I. Papageorgiou, J. De Roo, C. Huszka, D. Colaert Formalization of treatment guidelines using Fuzzy Cognitive Mapping and semantic web tools Journal of Biomedical Informatics, vol. 45, no.1, pp. 45-60, 2012
D. Iakovidis, and C. Smailis A Semantic Model for Multimodal Data Mining in Healthcare Information Systems Accepted in Studies in Health Technology and Informatics, MIE, vol. 180, pp. 574-578, IOS Press, 2012
C.V. Smailis, and D.K. Iakovidis Ontology-Based Automatic Image Annotation Exploiting Generalized Qualitative Spatial Semantics Lecture Notes in Computer Science, SETN, (Berlin, Heidelberg: Springer), LNAI pp.205-214, 2012
2011
Nassim Douali, Jos De Roo, E. Papageorgiou, M.-C. Jaulent In Proc. IEEE International Conference of Fuzzy Systems (FUZZ IEEE), June 27-30, Taipei, Taiwan, 2011 In Proc. 10th International Workshop on Biomedical Engineering, Kos Island, Greece, Oct. 2011
D.K. Iakovidis, and C.V Smailis Efficient Semantically-Aware Annotation of Images In Proc. 10th International Workshop on Biomedical Engineering, Kos Island, Greece, Oct. 2011
S. Tsevas, and D.K. Iakovidis Fusion of Multimodal Temporal Clinical Data for the Retrieval of Similar Patient Cases In Proc. 10th International Workshop on Biomedical Engineering, Kos Island, Greece, Oct. 2011
E.I. Papageorgiou, Jos De Roo, C. Huszka, D. Colaert Application of cognitive maps using semantic web approaches to model medical knowledge Proc. of International Conference of Artificial Intelligence, ICAI 2011, July, Las Vegas, USA, pp.675-683
Rémy Choquet Partage de données biomédicales : modèles, sémantique et qualité. Université Pierre et Marie Curie
D.K. Iakovidis, S. Tsevas, M.A. Savelonas, G. Papamichalis Image Analysis Framework for Infection Monitoring IEEE Transactions on Biomedical Engineering, vol. 59, no. 4, pp.1135-1144, 2011
S. Tsevas, and D.K. Iakovidis Measuring the Relative Extent of Pulmonary Infiltrates by Hierarchical Classification of Patient-Specific Image Features Measurement Science and Technology, IOP Publishing, vol.22, 114017, 2011
2010
E. I. Papageorgiou A novel approach on constructed dynamic Fuzzy Cognitive Maps using fuzzified decision trees and knowledge-extraction techniques Fuzzy Cognitive Maps: Advances in Theory, Methodologies, Tools, Applications, edited by M. Glykas, Springer Verlag Berlin, July 2010
S. Schulz, D. Schober, D. Raufie and M. Boeker Pre and post coordination requirements for DL Ontology Engineering European Conference on Artificial Intelligence (ECAI 2010), Lisbon, Portugal, August 16-20, 2010
D. Schober Ontology simplifications, new buzzword or real need Workshop of Ontologies in Biomedicine and Life Sciences (OBML 2010), Mannheim, Germany, September 9-10, 2010
D. Schober, M. Boeker, J. Bullenkamp, C. Huszka, K. Depraetere, N. Nadah, R. Choquet, D. Christel, and S. Schulz The DebugIT Core Ontology: semantic integration of antibiotics resistance patterns, in: D. Ouagne et al, Ensuring HL7-based information model requirements within an ontology framework MEDINFO 2010, Cape Town, South Africa September 13-16, 2010
R. Choquet, S. Qouiyd, D. Ouagne, E. Pasche, C. Daniel, O. Boussaïd, M.-C. Jaulent The Information Quality Triangle: a methodology to assess Clinical Information quality
http://www.ncbi.nlm.nih.gov/pubmed/20841776
MEDINFO 2010, Cape Town, South Africa September 13-16, 2010
S. Tsevas and D.K. Iakovidis Patient Specific Normalization of Chest Radiographs and Hierarchical Classification of Bacterial Infection Patterns Proceedings of IEEE International Conference on Imaging Systems and Techniques, pp. 156-160, Thessaloniki, Greece, 2010
D.K. Iakovidis and E. Papageorgiou Intuitionistic Fuzzy Cognitive Maps for Medical Decision Making IEEE Transactions on Information Technology in Biomedicine, 2010
S. Tsevas, D.K. Iakovidis and G. Papamichalis Unsupervised Mining of Radiographic Pulmonary Infection Patterns, Engineering Intelligent Systems for Electrical Engineering and Communications CRL Publishing, special issue on Artificial Intelligence Applications and Innovations, Vol. 17, No. 2/3, 2009/2010
A. Woznica, A. Kalousis and M. Hilario Adaptive Matching Based Kernels for Labelled Graphs Pacific-Asia Conference on Knowledge Discovery and Data Mining (PAKDD 2010), Hyderabad, India, June 21-24, 2010
A. Woznica and A. Kalousis A New Framework for Dissimilarity and Similarity Learning Pacific-Asia Conference on Knowledge Discovery and Data Mining (PAKDD 2010), pp.386-397, Hyderabad, India, June 21-24, 2010
P. Singleton Perspectives: Do researchers know what they are doing? Archives of Diseases in Childhood, 2011;96:3-4 doi:10.1136/adc.2009.181636, published June 2010
D. Teodoro et al Automatic IPC encoding and novelty tracking for effective patent mining NTCIR-8 Workshop Meeting (2010), Tokyo, Japan, June 15-18, 2010
E. I. Papageorgiou A novel approach on constructed dynamic Fuzzy Cognitive Maps using fuzzified decision trees and knowledge-extraction technique Fuzzy Cognitive Maps: Advances in Theory, Methodologies, Tools, Applications, edited by M. Glykas, Springer Verlag Berlin, July 2010
A. Woznica and A. Kalousis Adaptive Distances on Sets of Vectors 10th IEEE International Conference on Data Mining (ICDM 2010), Sydney, Australia, December 14-17, 2010
D. Teodoro et al Automatic prior art searching and patent encoding at CLEF-IP'10 CLEF 2010 LABs and Workshops, Notebook Papers, Padua, Italy, September 22-23, 2010
D. Schober, M. Boeker, S. Schulz and I. Tudose Developing DCO: The DebugIT Core Ontology for Antibiotics Resistance Modelling SMBM 2010, Symposium on Semantic Mining in Biomedicine, European Bioinformatics Institute, Hinxton, Cambridgeshire, UK, October 25 -26, 2010
E. I. Papageorgiou and W. Froelich Forecasting the State of Pulmonary Infection by the Application of Fuzzy Cognitive Maps IEEE International Conference on Information Technology and Applications in Biomedicine, ITAB (ITAB 2010), Corfu, Greece, 3-5 November, 2010
E. I. Papageorgiou and A. Kannappan A Review Study about Fuzzy Cognitive Maps Applications International Conference on Communication and Computational Intelligence (INCOCCI), India, December 2010
E. I. Papageorgiou A Fuzzy Inference Map approach to cope with uncertainty in modelling medical knowledge and making decisions Journal of Intelligent Decision Technologies, 2010
S. Tsevas and D.K. Iakovidis Dynamic Time Warping Fusion for the Retrieval of Similar Patient Cases Represented by Multimodal Time-Series Medical Data IEEE International Conference on Information Technology and Applications in Biomedicine, Corfu, Greece, 2010
I. Toujilov and P. Taylor Ontology Transformation as a Procedural Extension of the Description Logic Reasoning Extended Semantic Web Conference (ESWC 2010), Heraklion, Greece, May 30 – June 3, 2010
2009
E. Papageorgiou, and D.K. Iakovidis Towards the Construction of Intuitionistic Fuzzy Cognitive Maps for Medical Decision Making In Proc. IEEE International Conference on Information Technology and Applications in Biomedicine, 2009, ISBN: 978-1-4244-5379-5
S. Tsevas, D.K. Iakovidis Automatic Evaluation of the Progress of Bacterial Pulmonary Infections in Temporal Radiographic Image Sequences 9th International Conference on Information Technology and Applications in Biomedicine in Larnaca, Cyprus, 2009
D.K. Iakovidis, D. Schober, M. Boeker, S. Schulz An Ontology of Image Representations for Medical Image Mining 9th International Conference on Information Technology and Applications in Biomedicine in Larnaca, Cyprus, 2009
D.K. Iakovidis, M. Savelonas Active Shape Model Aided by Selective Thresholding for Lung Field Segmentation in Chest Radiographs 9th International Conference on Information Technology and Applications in Biomedicine in Larnaca, Cyprus, 2009
D. Teodoro, E. Pasche, R. Wipfli, J. Gobeill, R. Choquet, C. Daniel, P. Ruch, C. Lovis Integration of biomedical data using federated databases Proceedings of Journées annuelles de la Société Suisse d’Informatique Médicale; SSIM 2009
E. Pasche, D. Teodoro, J. Gobeill, P. Ruch, C. Lovis QA-driven Guidelines Generation for Bacteriotherapy The annual AMIA symposium 2009 in November in San Francisco, USA
P. Ruch A Medical Informatics Perspective on Decision Support. Toward a Unified Research Paradigm Com-bining Biological vs. Clinical, Em-pirical vs. Legacy, and Structured vs. Unstructured Data Yearb Med Inform. 2009:96-8.PMID: 19855879
Schulz S., Karlsson D., Daniel C., Cools H. and Lovis C. Is the International Classification for Patient Safety (ICPS) a Classification? MIE 2009, Sarajevo
Lovis C., Douglas T., Pasche E., Ruch P., Colaert D., Stroetmann K. DebugIT: Building a European distributed clinical data mining network to foster the fight against microbial diseases PSIP workshop on patient safety
Huyen Do, Alexandros Kalousis, Melanie Hilario Feature weighting using margin and radius based error bound optimization in SVMs European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases 2009
Huyen Do, Alexandros Kalousis, Adam Woznica, and Melanie Hilario Margin and Radius Based Multiple Kernel Learning; Accepted for publication at the European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases 2009
E.I. Papageorgiou Medical decision making through fuzzy computational intelligent approaches 18th International Symposium on Methodologies for Intelligent Systems, ISMIS 2009, Prague
E.I. Papageorgiou, N.I. Papandrianos, G. Karagianni, D. Sfyras Fuzzy Cognitive Map based approach for assessing pulmonary infections 18th International Symposium on Methodologies for Intelligent Systems, ISMIS 2009, Prague
E.I. Papageorgiou, N.I. Papandrianos, G. Karagianni, G. Kyriazopoulos, D. Sfyras A fuzzy cognitive map based tool for prediction of infectious diseases FUZZIEEE 2009, World Congress, Korea
E.I. Papageorgiou A novel approach on designing augmented Fuzzy Cognitive Maps using fuzzified decision trees 4th international Symposium of Intelligence Computations and Applications, ISICA 2009, China
M. Savelonas, D.K. Iakovidis Shielding Active Shape Models against Weak Lung Field Boundaries for Segmentation of Chest Radiographs MICCAI’s 2nd International Workshop on Pulmonary Image Analysis, Sept. 2009
Teodoro, Choquet, Pasche, Gobeill, Daniel, Ruch, Lovis Biomedical Data Management: A Proposal Framework MIE 2009, Sarajevo
Pasche, Teodoro, Gobeill, Ruch, Lovis Automatic Medical Knowledge Acquisition Using QuestionAnswering MIE 2009, Sarajevo
S. Tsevas, D.K. Iakovidis, G. Papamichalis Mining Patterns of Lung Infections in Chest Radiographs Artificial Intelligence Applications and Innovations Conference in Thessaloniki, Greece, 2009
D.K. Iakovidis, and S. Tsevas Hierarchical Discovery of Patterns of Infections in Chest Radiographs Using Nonnegative Matrix Factorization International Workshop on Systems, Signal and Image Processing (IWSSIP), Halkida, Greece, 2009
D.K. Iakovidis, M.A. Savelonas, G. Papamichalis Robust Modelbased Detection of the Lung Field Boundaries in Portable Chest Radiographs Supported by Selective Thresholding accepted in Measurement Science and Technology, IOP Publishing
Stefan Schulz, Holger Stenzhorn, Martin Boeker, Barry Smith Strengths and Limitations of Formal Ontologies in the Biomedical Domain Electronic Journal of Communication, Information & Innovation in Health
Fred Freitas, Stefan Schulz, Eduardo Moraes Survey of current Terminologies and Ontologies in Biology and Medicine Electronic Journal of Communication, Information & Innovation in Health
G. Fransson, H. Gill, E Nilsson, S. Walther, H. Åhlfeldt, H. Hanberger IT solution for import of patient based microbiological data from routine laboratories to the Intensive Care Registry in Sweden 19th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID) 2009.
H Hanberger; H Gill ; G Fransson ; L Nilsson ; P Turner Trend analysis of antibiotic resistance and MIC distribution from 1997 to 2007 among Pseudomonas aeruginosa, Escherichia coli and Klebsiella pneumoniae in European ICUs ISICEM 2009
2008
D.K. Iakovidis Versatile Approximation of the Lung Field Boundaries in the Presence of Bacterial Pulmonary Infections IEEE International Conference on Bioinformatics and Biotechnology, , Athens, Greece, 2008.
Hanberger, Arman, Gill, Jindrak, Kalenic, Kurcz, Licker, Naaber, Scicluna, Vanis and Walther Surveillance of microbial resistance in European Intensive Care Units: a first report from the CareICU programme for improved infection control ICM Journal
D.K. Iakovidis, and G. Papamichalis Automatic Segmentation of the Lung Fields in Portable Chest Radiographs Based on Bézier Interpolation of Salient Control Points,” in Proc. IEEE International Conference on Imaging Systems and Techniques, Chania, Greece, 2008,
Lovis C, Colaert D, Stroetman V. DebugIT for Patient Safety – Improving the Treatment with Antibiotics through Multimedia Data, Mining of Heterogeneous Clinical Data MIE2008, Göteborg,Sweden
Fransson G, Walther S, Hanberger H et.al. Poster: Linking local microbiology databases with the Swedish ICU registry to examine impact on bacterial resistance on the critically ill patient SSAI conference Göteborg Sweden